3,740 research outputs found
Fermi level pinning induced electrostatic fields and band bending at organic heterojunctions
The energy level alignment at interfaces between organic semiconductors is of direct relevance to understand charge carrier generation and recombination in organic electronic devices. Commonly, work function changes observed upon interface formation are interpreted as interface dipoles. In this study, using ultraviolet and X ray photoelectron spectroscopy, complemented by electrostatic calculations, we find a huge work function decrease of up to 1.4 amp; 8201;eV at the C60 bottom layer zinc phthalocyanine ZnPc, top layer interface prepared on a molybdenum trioxide MoO3 substrate. However, detailed measurements of the energy level shifts and electrostatic calculations reveal that no interface dipole occurs. Instead, upon ZnPc deposition, a linear electrostatic potential gradient is generated across the C60 layer due to Fermi level pinning of ZnPc on the high work function C60 MoO3 substrate, and associated band bending within the ZnPc layer. This finding is generally of importance for understanding organic heterojunctions when Fermi level pinning is involved, as induced electrostatic fields alter the energy level alignment significantl
Probability Models for Degree Distributions of Protein Interaction Networks
The degree distribution of many biological and technological networks has
been described as a power-law distribution. While the degree distribution does
not capture all aspects of a network, it has often been suggested that its
functional form contains important clues as to underlying evolutionary
processes that have shaped the network. Generally, the functional form for the
degree distribution has been determined in an ad-hoc fashion, with clear
power-law like behaviour often only extending over a limited range of
connectivities. Here we apply formal model selection techniques to decide which
probability distribution best describes the degree distributions of protein
interaction networks. Contrary to previous studies this well defined approach
suggests that the degree distribution of many molecular networks is often
better described by distributions other than the popular power-law
distribution. This, in turn, suggests that simple, if elegant, models may not
necessarily help in the quantitative understanding of complex biological
processes.
Uncovering predictability in the evolution of the WTI oil futures curve
Accurately forecasting the price of oil, the world's most actively traded
commodity, is of great importance to both academics and practitioners. We
contribute by proposing a functional time series based method to model and
forecast oil futures. Our approach boasts a number of theoretical and practical
advantages including effectively exploiting underlying process dynamics missed
by classical discrete approaches. We evaluate the finite-sample performance
against established benchmarks using a model confidence set test. A realistic
out-of-sample exercise provides strong support for the adoption of our approach
with it residing in the superior set of models in all considered instances.Comment: 28 pages, 4 figures, to appear in European Financial Managemen
Large-scale structure of time evolving citation networks
In this paper we examine a number of methods for probing and understanding
the large-scale structure of networks that evolve over time. We focus in
particular on citation networks, networks of references between documents such
as papers, patents, or court cases. We describe three different methods of
analysis, one based on an expectation-maximization algorithm, one based on
modularity optimization, and one based on eigenvector centrality. Using the
network of citations between opinions of the United States Supreme Court as an
example, we demonstrate how each of these methods can reveal significant
structural divisions in the network, and how, ultimately, the combination of
all three can help us develop a coherent overall picture of the network's
shape.Comment: 10 pages, 6 figures; journal names for 4 references fixe
Analyzing the House Fly's Exploratory Behavior with Autoregression Methods
This paper presents a detailed characterization of the trajectory of a single
housefly with free range of a square cage. The trajectory of the fly was
recorded and transformed into a time series, which was fully analyzed using an
autoregressive model, which describes a stationary time series by a linear
regression of prior state values with the white noise. The main discovery was
that the fly switched styles of motion from a low dimensional regular pattern
to a higher dimensional disordered pattern. This discovered exploratory
behavior is, irrespective of the presence of food, characterized by anomalous
diffusion.Comment: 20 pages, 9 figures, 1 table, full pape
Model selection in High-Dimensions: A Quadratic-risk based approach
In this article we propose a general class of risk measures which can be used
for data based evaluation of parametric models. The loss function is defined as
generalized quadratic distance between the true density and the proposed model.
These distances are characterized by a simple quadratic form structure that is
adaptable through the choice of a nonnegative definite kernel and a bandwidth
parameter. Using asymptotic results for the quadratic distances we build a
quick-to-compute approximation for the risk function. Its derivation is
analogous to the Akaike Information Criterion (AIC), but unlike AIC, the
quadratic risk is a global comparison tool. The method does not require
resampling, a great advantage when point estimators are expensive to compute.
The method is illustrated using the problem of selecting the number of
components in a mixture model, where it is shown that, by using an appropriate
kernel, the method is computationally straightforward in arbitrarily high data
dimensions. In this same context it is shown that the method has some clear
advantages over AIC and BIC.Comment: Updated with reviewer suggestion
Detecting periodicity in experimental data using linear modeling techniques
Fourier spectral estimates and, to a lesser extent, the autocorrelation
function are the primary tools to detect periodicities in experimental data in
the physical and biological sciences. We propose a new method which is more
reliable than traditional techniques, and is able to make clear identification
of periodic behavior when traditional techniques do not. This technique is
based on an information theoretic reduction of linear (autoregressive) models
so that only the essential features of an autoregressive model are retained.
These models we call reduced autoregressive models (RARM). The essential
features of reduced autoregressive models include any periodicity present in
the data. We provide theoretical and numerical evidence from both experimental
and artificial data, to demonstrate that this technique will reliably detect
periodicities if and only if they are present in the data. There are strong
information theoretic arguments to support the statement that RARM detects
periodicities if they are present. Surrogate data techniques are used to ensure
the converse. Furthermore, our calculations demonstrate that RARM is more
robust, more accurate, and more sensitive, than traditional spectral
techniques.Comment: 10 pages (revtex) and 6 figures. To appear in Phys Rev E. Modified
styl
Variation in host home range size decreases rabies vaccination effectiveness by increasing the spatial spread of rabies virus
Animal movement influences the spatial spread of directly transmitted wildlife disease through host-host contact structure. Wildlife disease hosts vary in home range- associated foraging and social behaviours, which may increase the spread and intensity of disease outbreaks. The consequences of variation in host home range movement and space use on wildlife disease dynamics are poorly understood, but could help to predict disease spread and determine more effective disease management strategies. We developed a spatially explicit individual-based model to examine the effect of spatiotemporal variation in host home range size on the spatial spread rate, persistence and incidence of rabies virus (RABV) in raccoons (Procyon lotor). We tested the hypothesis that variation in home range size increases RABV spread and decreases vaccination effectiveness in host populations following pathogen invasion into a vaccination zone. We simulated raccoon demography and RABV dynamics across a range of magnitudes and variances in weekly home range size for raccoons. We examined how variable home range size influenced the relative effectiveness of three components of oral rabies vaccination (ORV) programmes targeting raccoons—timing and frequency of bait delivery, width of the ORV zone and proportion of hosts immunized. Variability in weekly home range size increased RABV spread rates by 1.2-fold to 5.2-fold compared to simulations that assumed a fixed home range size. More variable host home range sizes decreased relative vaccination effectiveness by 71% compared to less variable host home range sizes under conventional vaccination conditions. We found that vaccination timing was more influential for vaccination effectiveness than vaccination frequency or vaccination zone width. Our results suggest that variation in wildlife home range movement behaviour increases the spatial spread and incidence of RABV. Our vaccination results underscore the importance of prioritizing individual-level space use and movement data collection to understand wildlife disease dynamics and plan their effective control and elimination
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The Neurodynamic Decision Variable in Human Multi-Alternative Perceptual Choice
The neural dynamics underpinning binary perceptual decisions and their transformation into actions are well studied, but real-world decisions typically offer more than two response alternatives. How does decision-related evidence accumulation dynamically influence multiple action representations in humans? The heightened conservatism required in multiple compared to binary choice scenarios suggests a mechanism which compensates for increased uncertainty when multiple choices are present by supressing baseline activity. Here, we tracked action representations using corticospinal excitability during four and two-choice perceptual decisions, and modelled them using a sequential sampling framework. We found that the predictions made by leaky competing accumulator models in order to accommodate multiple choices (i.e. reduced baseline activity to compensate increased uncertainty) were borne out by dynamic changes in human action representations. This suggests a direct and continuous influence of interacting evidence accumulators, each favouring a different decision alternative, on downstream corticospinal excitability during complex choice
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